Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family protein | SAMN05216227_101750 | Not Available | Negative | 2086935 - 2087621 | 24615.5 |
| tryptophanyl-trna synthetase | SAMN05216227_101751 | Not Available | Positive | 2087710 - 2088747 | 37684.3 |
| catechol 2,3-dioxygenase | SAMN05216227_101752 | Not Available | Positive | 2088833 - 2089318 | 16938.1 |
| hypothetical chaperone protein | SAMN05216227_101753 | Not Available | Positive | 2089381 - 2090628 | 43539.4 |
| hypothetical protein | SAMN05216227_101754 | Not Available | Negative | 2090675 - 2090986 | 11113.0 |
| branched chain amino acid aminotransferase apoenzyme | SAMN05216227_101755 | Not Available | Positive | 2091128 - 2091991 | 30946.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN05216227_101756 | Not Available | Positive | 2092054 - 2092509 | 16644.2 |
| l,d-transpeptidase catalytic domain | SAMN05216227_101757 | Not Available | Negative | 2092552 - 2093106 | 20766.8 |
| aldehyde dehydrogenase (nad+) | SAMN05216227_101758 | Not Available | Negative | 2093525 - 2094970 | 51635.6 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN05216227_101759 | Not Available | Positive | 2095166 - 2095822 | 23581.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
