Pseudorhodobacter antarcticus

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudorhodobacter

Description

Pseudorhodobacter antarcticus is a Gram-negative, aerobic bacterium characterized by its rod shape. This microorganism is non-motile and exhibits psychrotolerant behavior, thriving optimally at a temperature of 16°C, although it can survive in lower temperatures. Pseudorhodobacter antarcticus has a single replicon, which is typical for many bacteria, indicating a streamlined genetic structure. The strain is cataloged under the accession number FOCO00000000.1. The psychrotolerant nature of Pseudorhodobacter antarcticus suggests its ability to adapt to cold environments, making it well-suited for life in polar regions. This adaptability may play a crucial role in biogeochemical cycles and microbial diversity in such ecosystems. As these bacteria can thrive in low-temperature conditions, they may influence nutrient cycling and organic matter decomposition in their habitats. Understanding the ecological role of Pseudorhodobacter antarcticus can provide insights into how microbial life persists and adapts in extreme environments, particularly in the context of climate change and its impact on polar ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudorhodobacter
SpeciesPseudorhodobacter antarcticus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatAntarctic intertidal sandy sediment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodobacter antarcticus strain CGMCC 1.10836 genome

Gene Summary

Adenine Count

768526 bp

Thymine Count

781293 bp

Guanine Count

1132698 bp

Cytosine Count

1114275 bp

Genome Length

3796802 bp

Protein-coding Genes

3770 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhomboid family proteinSAMN05216227_101750Not AvailableNegative2086935 - 208762124615.5
tryptophanyl-trna synthetaseSAMN05216227_101751Not AvailablePositive2087710 - 208874737684.3
catechol 2,3-dioxygenaseSAMN05216227_101752Not AvailablePositive2088833 - 208931816938.1
hypothetical chaperone proteinSAMN05216227_101753Not AvailablePositive2089381 - 209062843539.4
hypothetical proteinSAMN05216227_101754Not AvailableNegative2090675 - 209098611113.0
branched chain amino acid aminotransferase apoenzymeSAMN05216227_101755Not AvailablePositive2091128 - 209199130946.7
nucleotide-binding universal stress protein, uspa familySAMN05216227_101756Not AvailablePositive2092054 - 209250916644.2
l,d-transpeptidase catalytic domainSAMN05216227_101757Not AvailableNegative2092552 - 209310620766.8
aldehyde dehydrogenase (nad+)SAMN05216227_101758Not AvailableNegative2093525 - 209497051635.6
alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin)SAMN05216227_101759Not AvailablePositive2095166 - 209582223581.2

Displaying genes 2121 – 2130 of 3870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.