Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-alanine-dl-glutamate epimerase | SAMN05216227_101730 | Not Available | Positive | 2070024 - 2070986 | 33968.0 |
| d-alanine transaminase | SAMN05216227_101731 | Not Available | Positive | 2070990 - 2071853 | 31376.7 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05216227_101732 | Not Available | Negative | 2072010 - 2073575 | 51197.1 |
| hypothetical protein | SAMN05216227_101733 | Not Available | Negative | 2073814 - 2074119 | 11561.6 |
| pyruvate kinase | SAMN05216227_101734 | Not Available | Positive | 2074236 - 2075684 | 51702.5 |
| hypothetical protein | SAMN05216227_101735 | Not Available | Positive | 2075718 - 2075942 | 7825.06 |
| lsu ribosomal protein l35p | SAMN05216227_101736 | Not Available | Positive | 2076063 - 2076263 | 7391.41 |
| lsu ribosomal protein l20p | SAMN05216227_101737 | Not Available | Positive | 2076276 - 2076665 | 14345.2 |
| lysophospholipase l1 | SAMN05216227_101738 | Not Available | Negative | 2076717 - 2077406 | 24275.7 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05216227_101739 | Not Available | Positive | 2077550 - 2078626 | 39616.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
