Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN05216227_1001127 | Not Available | Positive | 118326 - 119096 | 27910.8 |
| hypothetical protein | SAMN05216227_1001128 | Not Available | Positive | 119148 - 120326 | 43598.1 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN05216227_1001129 | Not Available | Positive | 120339 - 120626 | 10938.1 |
| ribonuclease d | SAMN05216227_1001130 | Not Available | Negative | 120691 - 121848 | 42777.3 |
| thiol peroxidase (atypical 2-cys peroxiredoxin) | SAMN05216227_1001131 | Not Available | Negative | 121966 - 122454 | 16752.2 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05216227_1001132 | Not Available | Positive | 122568 - 123770 | 41860.4 |
| 16s rrna (guanine966-n2)-methyltransferase | SAMN05216227_1001133 | Not Available | Positive | 123770 - 124336 | 19787.0 |
| hypothetical protein | SAMN05216227_1001134 | Not Available | Positive | 124333 - 124848 | 18229.3 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05216227_1001135 | Not Available | Positive | 124845 - 125498 | 22652.2 |
| hypothetical protein | SAMN05216227_1001136 | Not Available | Negative | 125505 - 126407 | 29960.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
