Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00659 family protein | SAMN05216227_101645 | Not Available | Positive | 2012501 - 2013217 | 24524.7 |
| hypothetical protein | SAMN05216227_101646 | Not Available | Negative | 2014211 - 2014483 | 9881.84 |
| hypothetical protein | SAMN05216227_101647 | Not Available | Positive | 2014571 - 2014777 | 7567.16 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05216227_101648 | Not Available | Negative | 2014964 - 2016022 | 37627.8 |
| trap transporter, dctm subunit | SAMN05216227_101649 | Not Available | Negative | 2016044 - 2017333 | 45612.0 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05216227_101650 | Not Available | Negative | 2017333 - 2017923 | 20772.4 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05216227_101651 | Not Available | Negative | 2018010 - 2018525 | 18475.9 |
| predicted oxidoreductase | SAMN05216227_101652 | Not Available | Negative | 2018525 - 2019415 | 32188.6 |
| alkanesulfonate monooxygenase | SAMN05216227_101653 | Not Available | Negative | 2019415 - 2020572 | 42731.7 |
| transcriptional regulator, gntr family | SAMN05216227_101654 | Not Available | Positive | 2020663 - 2021364 | 25390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
