Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05216227_101625 | Not Available | Negative | 1990949 - 1992136 | 42038.8 |
| dna-binding transcriptional regulator, gntr family | SAMN05216227_101626 | Not Available | Positive | 1992334 - 1993047 | 25693.2 |
| transcriptional regulator, deor family | SAMN05216227_101627 | Not Available | Negative | 1993087 - 1993845 | 27053.3 |
| homodimeric glycerol 3-phosphate dehydrogenase (quinone) | SAMN05216227_101628 | Not Available | Positive | 1994092 - 1995687 | 58943.4 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05216227_101629 | Not Available | Positive | 1995689 - 1996777 | 39392.6 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05216227_101630 | Not Available | Positive | 1996781 - 1997863 | 39615.6 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05216227_101631 | Not Available | Positive | 1997860 - 1998732 | 32782.7 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05216227_101632 | Not Available | Positive | 1998732 - 1999547 | 30237.5 |
| predicted small integral membrane protein | SAMN05216227_101633 | Not Available | Positive | 1999549 - 1999821 | 9993.5 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05216227_101634 | Not Available | Positive | 1999901 - 2001622 | 63176.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
