Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhd protein | SAMN05216227_101542 | Not Available | Positive | 1933788 - 1934603 | 28284.8 |
| formate dehydrogenase subunit delta | SAMN05216227_101543 | Not Available | Positive | 1934593 - 1934814 | 8183.81 |
| transcriptional regulator, gntr family | SAMN05216227_101544 | Not Available | Negative | 1934811 - 1935515 | 26499.7 |
| trap transporter, dctm subunit | SAMN05216227_101545 | Not Available | Negative | 1935573 - 1936880 | 46049.2 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05216227_101546 | Not Available | Negative | 1936880 - 1937380 | 18586.3 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05216227_101547 | Not Available | Negative | 1937441 - 1938439 | 36024.7 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05216227_101548 | Not Available | Negative | 1938523 - 1939113 | 21190.0 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05216227_101549 | Not Available | Negative | 1939110 - 1940507 | 48426.5 |
| transcriptional regulator, gntr family | SAMN05216227_101550 | Not Available | Negative | 1940504 - 1941319 | 28950.9 |
| phenylpyruvate tautomerase ppta, 4-oxalocrotonate tautomerase family | SAMN05216227_101551 | Not Available | Positive | 1941460 - 1942038 | 21218.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
