Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 1822879 - 1822962 | Not Available |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN05216227_101422 | Not Available | Positive | 1823137 - 1823925 | 27770.2 |
| hypothetical protein | SAMN05216227_101423 | Not Available | Positive | 1824099 - 1824518 | 15144.3 |
| phosphoribosyl-atp pyrophosphatase | SAMN05216227_101424 | Not Available | Negative | 1824515 - 1824823 | 10872.0 |
| imidazole glycerol phosphate synthase subunit hisf | SAMN05216227_101425 | Not Available | Negative | 1824820 - 1825581 | 26206.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05216227_101426 | Not Available | Negative | 1825613 - 1826332 | 24409.5 |
| uncharacterized conserved protein, duf2147 family | SAMN05216227_101427 | Not Available | Positive | 1826474 - 1826866 | 13795.7 |
| threonine/homoserine efflux transporter rhta | SAMN05216227_101428 | Not Available | Positive | 1826931 - 1827842 | 31407.0 |
| imidazole glycerol phosphate synthase subunit hish | SAMN05216227_101429 | Not Available | Negative | 1827839 - 1828477 | 23166.8 |
| imidazoleglycerol-phosphate dehydratase | SAMN05216227_101430 | Not Available | Negative | 1828478 - 1829065 | 21102.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
