Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216227_10135 | Not Available | Positive | 1713005 - 1713253 | 9096.21 |
| hint domain-containing protein | SAMN05216227_10136 | Not Available | Positive | 1713440 - 1713901 | 16469.9 |
| hint domain-containing protein | SAMN05216227_10137 | Not Available | Positive | 1713885 - 1714232 | 12329.7 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN05216227_10138 | Not Available | Negative | 1714243 - 1715172 | 32504.3 |
| isovaleryl-coa dehydrogenase | SAMN05216227_10139 | Not Available | Positive | 1715211 - 1716368 | 41218.0 |
| 3-methylcrotonyl-coa carboxylase beta subunit | SAMN05216227_101310 | Not Available | Positive | 1716417 - 1718021 | 56759.2 |
| 3-methylcrotonyl-coa carboxylase alpha subunit | SAMN05216227_101311 | Not Available | Positive | 1718096 - 1720030 | 67989.0 |
| glutathione s-transferase | SAMN05216227_101312 | Not Available | Positive | 1720027 - 1720668 | 23704.5 |
| hydroxymethylglutaryl-coa lyase | SAMN05216227_101313 | Not Available | Positive | 1720669 - 1721544 | 30646.6 |
| methylglutaconyl-coa hydratase | SAMN05216227_101314 | Not Available | Positive | 1721525 - 1722310 | 27137.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
