Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| octaprenyl-diphosphate synthase | SAMN05216227_100187 | Not Available | Negative | 76256 - 77251 | 35739.8 |
| putative signal transducing protein | SAMN05216227_100188 | Not Available | Positive | 77324 - 77539 | 7899.76 |
| trna1(val) a37 n6-methylase trmn6 | SAMN05216227_100189 | Not Available | Positive | 77564 - 78322 | 26351.0 |
| hypothetical protein | SAMN05216227_100190 | Not Available | Positive | 78424 - 78588 | 6238.68 |
| eama domain-containing membrane protein rard | SAMN05216227_100191 | Not Available | Negative | 78569 - 79450 | 29986.3 |
| 3-oxoacyl-[acyl-carrier-protein] reductase /acetoacetyl-coa reductase | SAMN05216227_100192 | Not Available | Negative | 79565 - 80290 | 25261.3 |
| acetyl-coa acetyltransferase | SAMN05216227_100193 | Not Available | Negative | 80399 - 81574 | 40476.6 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216227_100194 | Not Available | Negative | 81709 - 82539 | 30779.3 |
| dna-3-methyladenine glycosylase i | SAMN05216227_100195 | Not Available | Positive | 82673 - 83254 | 21433.6 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05216227_100196 | Not Available | Positive | 83271 - 83630 | 13248.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
