Pseudorhodobacter antarcticus

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudorhodobacter

Description

Pseudorhodobacter antarcticus is a Gram-negative, aerobic bacterium characterized by its rod shape. This microorganism is non-motile and exhibits psychrotolerant behavior, thriving optimally at a temperature of 16°C, although it can survive in lower temperatures. Pseudorhodobacter antarcticus has a single replicon, which is typical for many bacteria, indicating a streamlined genetic structure. The strain is cataloged under the accession number FOCO00000000.1. The psychrotolerant nature of Pseudorhodobacter antarcticus suggests its ability to adapt to cold environments, making it well-suited for life in polar regions. This adaptability may play a crucial role in biogeochemical cycles and microbial diversity in such ecosystems. As these bacteria can thrive in low-temperature conditions, they may influence nutrient cycling and organic matter decomposition in their habitats. Understanding the ecological role of Pseudorhodobacter antarcticus can provide insights into how microbial life persists and adapts in extreme environments, particularly in the context of climate change and its impact on polar ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudorhodobacter
SpeciesPseudorhodobacter antarcticus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatAntarctic intertidal sandy sediment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodobacter antarcticus strain CGMCC 1.10836 genome

Gene Summary

Adenine Count

768526 bp

Thymine Count

781293 bp

Guanine Count

1132698 bp

Cytosine Count

1114275 bp

Genome Length

3796802 bp

Protein-coding Genes

3770 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thymidylate kinaseSAMN05216227_101211Not AvailableNegative1625603 - 162627724654.7
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6)SAMN05216227_101212Not AvailableNegative1626255 - 162740941352.6
sporulation related domain-containing proteinSAMN05216227_101213Not AvailableNegative1627443 - 162825827726.7
ca2+-binding protein, rtx toxin-relatedSAMN05216227_101214Not AvailableNegative1628471 - 1633006150995.0
hint domain-containing proteinSAMN05216227_101215Not AvailablePositive1633427 - 163450038475.0
ssu ribosomal protein s4pSAMN05216227_101216Not AvailablePositive1634742 - 163536223460.4
histidinol phosphate aminotransferase apoenzymeSAMN05216227_101217Not AvailablePositive1635499 - 163658438667.2
prephenate dehydrogenaseSAMN05216227_101218Not AvailablePositive1636584 - 163754333458.2
uncharacterized conserved proteinSAMN05216227_101219Not AvailablePositive1637540 - 163838529733.9
hypothetical proteinSAMN05216227_101220Not AvailableNegative1638387 - 163937335435.8

Displaying genes 1651 – 1660 of 3870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.