Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase, small subunit | SAMN05216227_101177 | Not Available | Negative | 1605330 - 1605935 | 22260.8 |
| 3-isopropylmalate dehydratase, large subunit | SAMN05216227_101178 | Not Available | Negative | 1605948 - 1607366 | 50707.7 |
| mechanosensitive ion channel | SAMN05216227_101179 | Not Available | Positive | 1607621 - 1608955 | 48205.5 |
| ribosome-associated protein | SAMN05216227_101180 | Not Available | Positive | 1609152 - 1609538 | 14444.2 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN05216227_101181 | Not Available | Positive | 1609538 - 1610008 | 16825.3 |
| phosphoglycerate mutase | SAMN05216227_101182 | Not Available | Positive | 1610128 - 1611645 | 52376.7 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN05216227_101183 | Not Available | Positive | 1611642 - 1612766 | 39098.3 |
| carboxyl-terminal processing protease | SAMN05216227_101184 | Not Available | Positive | 1612775 - 1614112 | 47447.5 |
| putative (di)nucleoside polyphosphate hydrolase | SAMN05216227_101185 | Not Available | Positive | 1614178 - 1614657 | 17844.4 |
| transposase | SAMN05216227_101186 | Not Available | Positive | 1615188 - 1615456 | 10057.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
