Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN05216227_10104 | Not Available | Negative | 1410094 - 1410834 | 26256.0 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05216227_10105 | Not Available | Positive | 1410846 - 1411814 | 34849.7 |
| ompa-ompf porin, oop family | SAMN05216227_10106 | Not Available | Positive | 1411872 - 1413830 | 68633.6 |
| hypothetical protein | SAMN05216227_10107 | Not Available | Positive | 1413891 - 1414223 | 12753.2 |
| thiol-disulfide interchange protein, contains dsbc and dsbd domains | SAMN05216227_10108 | Not Available | Negative | 1414292 - 1415077 | 27427.2 |
| putative transcriptional regulator | SAMN05216227_10109 | Not Available | Positive | 1415243 - 1415797 | 19446.3 |
| d-alanyl-d-alanine carboxypeptidase | SAMN05216227_101010 | Not Available | Negative | 1415888 - 1417486 | 55994.2 |
| putative hydrolase of the had superfamily | SAMN05216227_101011 | Not Available | Negative | 1417680 - 1418393 | 25593.9 |
| atp-dependent clp protease adaptor protein clps | SAMN05216227_101012 | Not Available | Positive | 1418479 - 1418820 | 12966.8 |
| 16s rrna m(2)g 1207 methyltransferase | SAMN05216227_101013 | Not Available | Positive | 1418893 - 1419894 | 35973.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
