Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05216227_100156 | Not Available | Positive | 49898 - 50527 | 22203.5 |
| ribosome biogenesis gtpase | SAMN05216227_100158 | Not Available | Positive | 50767 - 51774 | 35670.3 |
| hypothetical protein | SAMN05216227_100159 | Not Available | Negative | 51788 - 52237 | 15700.0 |
| dna polymerase-3 subunit gamma/tau | SAMN05216227_100160 | Not Available | Positive | 52331 - 54082 | 62448.3 |
| hypothetical protein | SAMN05216227_100161 | Not Available | Positive | 54085 - 54429 | 11960.8 |
| dna replication and repair protein recr | SAMN05216227_100162 | Not Available | Positive | 54433 - 55065 | 22483.2 |
| dna-binding response regulator, lytr/algr family | SAMN05216227_100163 | Not Available | Positive | 55435 - 56325 | 32505.1 |
| hypothetical protein | SAMN05216227_100164 | Not Available | Negative | 56397 - 57170 | 28264.2 |
| ribonuclease t2 | SAMN05216227_100165 | Not Available | Positive | 57297 - 57941 | 23393.1 |
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN05216227_100166 | Not Available | Negative | 58015 - 59007 | 34821.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
