Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l1p | SAMN05216227_100972 | Not Available | Positive | 1348990 - 1349688 | 23932.1 |
| lsu ribosomal protein l10p | SAMN05216227_100973 | Not Available | Positive | 1350000 - 1350515 | 17508.5 |
| lsu ribosomal protein l12p | SAMN05216227_100974 | Not Available | Positive | 1350587 - 1350958 | 12794.5 |
| dna-directed rna polymerase subunit beta | SAMN05216227_100975 | Not Available | Positive | 1351212 - 1355345 | 153382.0 |
| dna-directed rna polymerase subunit beta' | SAMN05216227_100976 | Not Available | Positive | 1355417 - 1359628 | 155313.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05216227_100977 | Not Available | Positive | 1359775 - 1360695 | 32610.4 |
| ssu ribosomal protein s12p | SAMN05216227_100978 | Not Available | Positive | 1360962 - 1361333 | 14284.8 |
| ssu ribosomal protein s7p | SAMN05216227_100979 | Not Available | Positive | 1361345 - 1361815 | 18018.7 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN05216227_100980 | Not Available | Positive | 1361825 - 1363948 | 78364.7 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN05216227_100981 | Not Available | Positive | 1364031 - 1365206 | 43084.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
