Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN05216227_100898 | Not Available | Positive | 1226767 - 1228362 | 56769.4 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN05216227_100899 | Not Available | Positive | 1228378 - 1229319 | 34739.2 |
| altronate hydrolase | SAMN05216227_1008100 | Not Available | Positive | 1229332 - 1230819 | 52371.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN05216227_1008101 | Not Available | Positive | 1230833 - 1231801 | 34021.7 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05216227_1008102 | Not Available | Positive | 1231801 - 1232715 | 32734.8 |
| hypothetical protein | SAMN05216227_1008103 | Not Available | Positive | 1232728 - 1233642 | 31224.2 |
| branched-chain amino acid transport protein | SAMN05216227_1008104 | Not Available | Negative | 1233682 - 1234020 | 12238.4 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN05216227_1008105 | Not Available | Negative | 1234017 - 1234757 | 26310.1 |
| dihydroxy-acid dehydratase | SAMN05216227_1008106 | Not Available | Positive | 1234831 - 1236612 | 64495.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05216227_1008107 | Not Available | Positive | 1236623 - 1237357 | 25598.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
