Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter secretion inner membrane protein tamb | SAMN05216227_100888 | Not Available | Positive | 1212666 - 1216514 | 132240.0 |
| membrane protein | SAMN05216227_100889 | Not Available | Negative | 1216511 - 1217353 | 29825.3 |
| hypothetical protein | SAMN05216227_100890 | Not Available | Negative | 1217456 - 1217692 | 6996.32 |
| group 4 capsule polysaccharide lipoprotein gfcb, yjbf | SAMN05216227_100891 | Not Available | Negative | 1217714 - 1218442 | 26183.9 |
| exopolysaccharide biosynthesis protein ybjh | SAMN05216227_100892 | Not Available | Negative | 1218439 - 1220658 | 80789.8 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05216227_100893 | Not Available | Negative | 1220747 - 1222705 | 69733.1 |
| lactate dehydrogenase | SAMN05216227_100894 | Not Available | Positive | 1223020 - 1223967 | 33603.4 |
| transcriptional regulator, gntr family | SAMN05216227_100895 | Not Available | Negative | 1223960 - 1224619 | 24252.4 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05216227_100896 | Not Available | Positive | 1224850 - 1225857 | 36430.3 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05216227_100897 | Not Available | Positive | 1225971 - 1226762 | 30018.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
