Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | SAMN05216227_100878 | Not Available | Negative | 1199270 - 1200298 | 37268.1 |
| d-xylose isomerase | SAMN05216227_100879 | Not Available | Negative | 1200407 - 1201708 | 48679.2 |
| xylulokinase | SAMN05216227_100880 | Not Available | Negative | 1201705 - 1203141 | 49551.3 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05216227_100881 | Not Available | Negative | 1203141 - 1203899 | 27465.3 |
| d-xylose transport system permease protein | SAMN05216227_100882 | Not Available | Negative | 1203911 - 1205218 | 45903.5 |
| d-xylose transport system substrate-binding protein | SAMN05216227_100883 | Not Available | Negative | 1205347 - 1206372 | 35014.6 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05216227_100884 | Not Available | Positive | 1206589 - 1207878 | 45255.5 |
| repeat domain-containing protein | SAMN05216227_100885 | Not Available | Positive | 1207875 - 1209380 | 53928.0 |
| cytochrome c peroxidase | SAMN05216227_100886 | Not Available | Negative | 1209377 - 1210699 | 45969.1 |
| autotransporter secretion outer membrane protein tama | SAMN05216227_100887 | Not Available | Positive | 1210861 - 1212666 | 63028.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
