Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, winged helix family | SAMN05216227_10088 | Not Available | Negative | 1132346 - 1133059 | 26459.2 |
| transcriptional regulator, marr family | SAMN05216227_10089 | Not Available | Negative | 1133056 - 1133553 | 18453.2 |
| branched chain amino acid aminotransferase apoenzyme | SAMN05216227_100810 | Not Available | Positive | 1133710 - 1134576 | 31863.1 |
| hypothetical protein | SAMN05216227_100811 | Not Available | Negative | 1134614 - 1134802 | 7182.44 |
| epoxyqueuosine reductase | SAMN05216227_100812 | Not Available | Negative | 1134868 - 1135890 | 37221.7 |
| pts iia-like nitrogen-regulatory protein ptsn | SAMN05216227_100813 | Not Available | Negative | 1135896 - 1136360 | 16614.3 |
| ssu ribosomal protein s30p /sigma 54 modulation protein | SAMN05216227_100814 | Not Available | Negative | 1136396 - 1136971 | 21731.0 |
| lipopolysaccharide export system atp-binding protein | SAMN05216227_100815 | Not Available | Negative | 1137265 - 1138026 | 28261.4 |
| lipopolysaccharide export system protein lpta | SAMN05216227_100816 | Not Available | Negative | 1138026 - 1138523 | 16681.9 |
| lipopolysaccharide export system protein lptc | SAMN05216227_100817 | Not Available | Negative | 1138537 - 1139151 | 21444.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
