Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloramphenicol-sensitive protein rard | SAMN05216227_1007122 | Not Available | Negative | 1112413 - 1113363 | 34186.6 |
| superoxide dismutase, fe-mn family | SAMN05216227_1007123 | Not Available | Negative | 1113422 - 1114024 | 22097.9 |
| sarcosine oxidase subunit gamma | SAMN05216227_1007124 | Not Available | Negative | 1114137 - 1114682 | 19213.4 |
| sarcosine oxidase subunit alpha | SAMN05216227_1007125 | Not Available | Negative | 1114675 - 1117614 | 106353.0 |
| sarcosine oxidase subunit delta | SAMN05216227_1007126 | Not Available | Negative | 1117611 - 1117934 | 12175.4 |
| sarcosine oxidase subunit beta | SAMN05216227_1007127 | Not Available | Negative | 1118053 - 1119300 | 44916.0 |
| cytochrome c-type biogenesis protein ccmh | SAMN05216227_1007128 | Not Available | Positive | 1119512 - 1120732 | 43723.5 |
| putative holliday junction resolvase | SAMN05216227_1007129 | Not Available | Positive | 1120729 - 1121217 | 17406.3 |
| hypothetical protein | SAMN05216227_1007130 | Not Available | Positive | 1121210 - 1121434 | 8502.51 |
| uncharacterized membrane protein yfca | SAMN05216227_1007131 | Not Available | Negative | 1121435 - 1122256 | 28729.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
