Pseudorhodobacter antarcticus

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudorhodobacter

Description

Pseudorhodobacter antarcticus is a Gram-negative, aerobic bacterium characterized by its rod shape. This microorganism is non-motile and exhibits psychrotolerant behavior, thriving optimally at a temperature of 16°C, although it can survive in lower temperatures. Pseudorhodobacter antarcticus has a single replicon, which is typical for many bacteria, indicating a streamlined genetic structure. The strain is cataloged under the accession number FOCO00000000.1. The psychrotolerant nature of Pseudorhodobacter antarcticus suggests its ability to adapt to cold environments, making it well-suited for life in polar regions. This adaptability may play a crucial role in biogeochemical cycles and microbial diversity in such ecosystems. As these bacteria can thrive in low-temperature conditions, they may influence nutrient cycling and organic matter decomposition in their habitats. Understanding the ecological role of Pseudorhodobacter antarcticus can provide insights into how microbial life persists and adapts in extreme environments, particularly in the context of climate change and its impact on polar ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudorhodobacter
SpeciesPseudorhodobacter antarcticus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatAntarctic intertidal sandy sediment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodobacter antarcticus strain CGMCC 1.10836 genome

Gene Summary

Adenine Count

768526 bp

Thymine Count

781293 bp

Guanine Count

1132698 bp

Cytosine Count

1114275 bp

Genome Length

3796802 bp

Protein-coding Genes

3770 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal protein s18 acetylase rimiSAMN05216227_1007112Not AvailablePositive1098733 - 109917316958.0
gtp-binding proteinSAMN05216227_1007113Not AvailableNegative1099184 - 110066255055.2
outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeatSAMN05216227_1007114Not AvailableNegative1100723 - 110209046315.2
hypothetical proteinSAMN05216227_1007115Not AvailableNegative1102194 - 110285323060.6
membrane fusion protein, multidrug efflux systemSAMN05216227_1007116Not AvailablePositive1103176 - 110441142680.9
multidrug efflux pumpSAMN05216227_1007117Not AvailablePositive1104408 - 1108139133473.0
hypothetical proteinSAMN05216227_1007118Not AvailablePositive1108285 - 110877616412.3
hypothetical proteinSAMN05216227_1007119Not AvailablePositive1108825 - 11091129823.65
atp-binding cassette, subfamily bSAMN05216227_1007120Not AvailableNegative1109127 - 111096867331.0
lysm domain-containing proteinSAMN05216227_1007121Not AvailableNegative1111038 - 111229441541.2

Displaying genes 1131 – 1140 of 3870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.