Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN05216227_1007112 | Not Available | Positive | 1098733 - 1099173 | 16958.0 |
| gtp-binding protein | SAMN05216227_1007113 | Not Available | Negative | 1099184 - 1100662 | 55055.2 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN05216227_1007114 | Not Available | Negative | 1100723 - 1102090 | 46315.2 |
| hypothetical protein | SAMN05216227_1007115 | Not Available | Negative | 1102194 - 1102853 | 23060.6 |
| membrane fusion protein, multidrug efflux system | SAMN05216227_1007116 | Not Available | Positive | 1103176 - 1104411 | 42680.9 |
| multidrug efflux pump | SAMN05216227_1007117 | Not Available | Positive | 1104408 - 1108139 | 133473.0 |
| hypothetical protein | SAMN05216227_1007118 | Not Available | Positive | 1108285 - 1108776 | 16412.3 |
| hypothetical protein | SAMN05216227_1007119 | Not Available | Positive | 1108825 - 1109112 | 9823.65 |
| atp-binding cassette, subfamily b | SAMN05216227_1007120 | Not Available | Negative | 1109127 - 1110968 | 67331.0 |
| lysm domain-containing protein | SAMN05216227_1007121 | Not Available | Negative | 1111038 - 1112294 | 41541.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
