Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN05216227_100792 | Not Available | Positive | 1076811 - 1077947 | 40912.9 |
| lipid-a-disaccharide synthase | SAMN05216227_100793 | Not Available | Negative | 1078088 - 1079209 | 39737.2 |
| hypothetical protein | SAMN05216227_100794 | Not Available | Negative | 1079206 - 1080024 | 28537.9 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN05216227_100795 | Not Available | Negative | 1080021 - 1080806 | 27321.0 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN05216227_100796 | Not Available | Negative | 1080803 - 1081273 | 17025.2 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05216227_100797 | Not Available | Negative | 1081347 - 1081916 | 20689.0 |
| beta-barrel assembly machine subunit bama | SAMN05216227_100798 | Not Available | Negative | 1081916 - 1084273 | 85622.9 |
| hypothetical protein | SAMN05216227_100799 | Not Available | Negative | 1084407 - 1084544 | 4875.2 |
| regulator of sigma e protease | SAMN05216227_1007100 | Not Available | Negative | 1084702 - 1086051 | 47475.9 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05216227_1007101 | Not Available | Negative | 1086087 - 1087271 | 41508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
