Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05216227_100126 | Not Available | Negative | 20427 - 21770 | 46616.5 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05216227_100127 | Not Available | Positive | 21888 - 22958 | 38091.6 |
| l,d-transpeptidase catalytic domain | SAMN05216227_100128 | Not Available | Negative | 23019 - 23555 | 19051.5 |
| cystathione beta-lyase | SAMN05216227_100129 | Not Available | Negative | 23552 - 24724 | 42721.2 |
| peptide deformylase | SAMN05216227_100130 | Not Available | Positive | 24870 - 25391 | 19434.9 |
| peptide deformylase | SAMN05216227_100131 | Not Available | Positive | 25391 - 25867 | 17318.2 |
| peptide deformylase | SAMN05216227_100132 | Not Available | Positive | 25912 - 26358 | 16394.0 |
| methionyl-trna formyltransferase | SAMN05216227_100133 | Not Available | Positive | 26419 - 27315 | 31941.6 |
| hypothetical protein | SAMN05216227_100134 | Not Available | Negative | 27323 - 27673 | 13010.6 |
| l-threonine o-3-phosphate decarboxylase | SAMN05216227_100135 | Not Available | Positive | 27834 - 28769 | 33040.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
