Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system permease protein | SAMN05216227_10072 | Not Available | Positive | 976231 - 977364 | 41461.1 |
| lipopolysaccharide export system permease protein | SAMN05216227_10073 | Not Available | Positive | 977361 - 978455 | 39209.7 |
| lps-assembly protein | SAMN05216227_10074 | Not Available | Positive | 978455 - 980596 | 77707.1 |
| periplasmic chaperone for outer membrane proteins sura | SAMN05216227_10075 | Not Available | Positive | 980606 - 981907 | 46105.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05216227_10076 | Not Available | Positive | 981981 - 982907 | 32171.2 |
| dimethyladenosine transferase | SAMN05216227_10077 | Not Available | Positive | 982894 - 983730 | 29993.7 |
| protein of unknown function | SAMN05216227_10078 | Not Available | Negative | 983829 - 984731 | 34106.3 |
| [protein release factor]-glutamine n5-methyltransferase | SAMN05216227_10079 | Not Available | Negative | 984976 - 985824 | 29560.8 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN05216227_100710 | Not Available | Negative | 985821 - 986873 | 38574.1 |
| protein of unknown function | SAMN05216227_100711 | Not Available | Negative | 986967 - 987404 | 15649.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
