Pantoea rodasii str. ND03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea rodasii str. ND03 is characterized by the presence of flagella, which suggests it is motile and may have implications for its ecological interactions and behavior in various environments. This motility can assist in nutrient acquisition and colonization, potentially influencing its role within microbial communities. The strain possesses a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability and efficiency in resource utilization. This feature might allow for more efficient replication and regulation of essential genes, which can be advantageous in fluctuating environments. The genomic information for Pantoea rodasii str. ND03 is available under the accession number JTJJ00000000.1, providing a basis for further genomic studies that could elucidate its metabolic pathways, ecological roles, and potential applications in biotechnology or agriculture. In summary, the motility conferred by flagella and the presence of a single replicon suggest that Pantoea rodasii str. ND03 may be well-equipped for adaptation and survival in diverse ecological niches. Understanding these traits can provide insights into its ecological interactions and potential uses in various biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea rodasii
StrainND03

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea rodasii strain ND03 Contig236, whole genome shotgun

Gene Summary

Adenine Count

1315179 bp

Thymine Count

1314591 bp

Guanine Count

1525045 bp

Cytosine Count

1525476 bp

Genome Length

5680291 bp

Protein-coding Genes

4999 genes

Non-Coding Genes

234 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoprotein nlpiQU24_01310Not AvailablePositive278487 - 27937133629.6
dead/deah box helicaseQU24_01315Not AvailablePositive279548 - 28143470144.1
short-chain dehydrogenaseQU24_01320Not AvailableNegative281499 - 28224525753.1
arac family transcriptional regulatorQU24_01325Not AvailablePositive282429 - 28334634171.5
hypothetical proteinQU24_01330Not AvailableNegative283350 - 28436036666.1
proteaseQU24_01335Not AvailableNegative284476 - 28536033058.6
proteaseQU24_01340Not AvailableNegative285370 - 28636537022.0
hypothetical proteinQU24_01345Not AvailablePositive286569 - 28709319466.7
acetyltransferaseQU24_01350Not AvailablePositive287087 - 28759318239.5
excinuclease abc subunit aQU24_01355Not AvailableNegative287577 - 28786410694.9

Displaying genes 441 – 450 of 5233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.