Pantoea rodasii str. ND03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea rodasii str. ND03 is characterized by the presence of flagella, which suggests it is motile and may have implications for its ecological interactions and behavior in various environments. This motility can assist in nutrient acquisition and colonization, potentially influencing its role within microbial communities. The strain possesses a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability and efficiency in resource utilization. This feature might allow for more efficient replication and regulation of essential genes, which can be advantageous in fluctuating environments. The genomic information for Pantoea rodasii str. ND03 is available under the accession number JTJJ00000000.1, providing a basis for further genomic studies that could elucidate its metabolic pathways, ecological roles, and potential applications in biotechnology or agriculture. In summary, the motility conferred by flagella and the presence of a single replicon suggest that Pantoea rodasii str. ND03 may be well-equipped for adaptation and survival in diverse ecological niches. Understanding these traits can provide insights into its ecological interactions and potential uses in various biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea rodasii
StrainND03

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea rodasii strain ND03 Contig236, whole genome shotgun

Gene Summary

Adenine Count

1315179 bp

Thymine Count

1314591 bp

Guanine Count

1525045 bp

Cytosine Count

1525476 bp

Genome Length

5680291 bp

Protein-coding Genes

4999 genes

Non-Coding Genes

234 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter atp-binding proteinQU24_01060Not AvailableNegative227718 - 22844326873.5
lipopolysaccharide transporterQU24_01065Not AvailableNegative228449 - 22900319785.7
lipopolysaccharide transporterQU24_01070Not AvailableNegative228978 - 22955021561.5
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseQU24_01075Not AvailableNegative229547 - 23011320366.7
d-arabinose 5-phosphate isomeraseQU24_01080Not AvailableNegative230127 - 23110735063.7
calcium/sodium:proton antiporterQU24_01085Not AvailableNegative231121 - 23210434936.9
abc transporter atp-binding proteinQU24_01090Not AvailablePositive232332 - 23314729637.2
abc transporter permeaseQU24_01095Not AvailablePositive233152 - 23393427524.6
organic solvent abc transporterQU24_01100Not AvailablePositive233939 - 23448119311.1
abc transporter substrate-binding proteinQU24_01105Not AvailablePositive234497 - 23512923866.7

Displaying genes 391 – 400 of 5233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.