Pantoea rodasii str. ND03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea rodasii str. ND03 is characterized by the presence of flagella, which suggests it is motile and may have implications for its ecological interactions and behavior in various environments. This motility can assist in nutrient acquisition and colonization, potentially influencing its role within microbial communities. The strain possesses a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability and efficiency in resource utilization. This feature might allow for more efficient replication and regulation of essential genes, which can be advantageous in fluctuating environments. The genomic information for Pantoea rodasii str. ND03 is available under the accession number JTJJ00000000.1, providing a basis for further genomic studies that could elucidate its metabolic pathways, ecological roles, and potential applications in biotechnology or agriculture. In summary, the motility conferred by flagella and the presence of a single replicon suggest that Pantoea rodasii str. ND03 may be well-equipped for adaptation and survival in diverse ecological niches. Understanding these traits can provide insights into its ecological interactions and potential uses in various biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea rodasii
StrainND03

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea rodasii strain ND03 Contig236, whole genome shotgun

Gene Summary

Adenine Count

1315179 bp

Thymine Count

1314591 bp

Guanine Count

1525045 bp

Cytosine Count

1525476 bp

Genome Length

5680291 bp

Protein-coding Genes

4999 genes

Non-Coding Genes

234 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Terminase endonuclease subunitQU24_21500Not AvailableNegative4610781 - 461144925055.4
Major capsid proteinQU24_21505Not AvailableNegative4611453 - 461252640193.5
Capsid scaffolding proteinQU24_21510Not AvailableNegative4612558 - 461340630969.1
Terminase atpase subunitQU24_21515Not AvailablePositive4613552 - 461531566503.8
Phage portal proteinQU24_21520Not AvailablePositive4615315 - 461633738956.2
Rna-directed dna polymeraseQU24_21525Not AvailableNegative4616348 - 461807865306.1
Hypothetical proteinQU24_21530Not AvailableNegative4618655 - 46188316493.85
Replication protein aQU24_21535Not AvailableNegative4618938 - 462119085545.1
Gp35QU24_21540Not AvailableNegative4621239 - 462182322318.6
Hypothetical proteinQU24_21545Not AvailableNegative4621820 - 46220478309.93

Displaying genes 131 – 140 of 5233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.