Pantoea rodasii str. DSM 26611

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea rodasii strain DSM 26611 is a notable bacterium characterized by its possession of flagella, which indicates motility and potential adaptability to various environments. This trait may play a significant role in its ecological interactions and survival strategies, as flagella allow for movement toward favorable conditions and away from adverse ones. The strain is defined by a single replicon, which suggests a streamlined genomic structure. This can impact its replication strategy and overall metabolic efficiency, potentially influencing its growth rate and adaptability to different substrates in its environment. The genomic information is accessible under the accession number PIQI00000000.1, providing a resource for further genetic and functional studies. Understanding the traits of Pantoea rodasii DSM 26611 contributes to the broader knowledge of the Pantoea genus, which is known for its diverse ecological roles, including plant growth promotion and biocontrol. The presence of flagella and the genomic structure may allow this strain to thrive in specific niches, where it can interact with plant hosts or compete with other microorganisms. This adaptability could be significant in agricultural contexts, where Pantoea species are explored for their beneficial traits. Thus, the characteristics of Pantoea rodasii DSM 26611 underline its potential as an organism of interest for ecological research and practical applications in crop management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea rodasii
StrainDSM 26611

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea rodasii strain DSM 26611 PRCB31, whole genome shotgun

Gene Summary

Adenine Count

1327041 bp

Thymine Count

1324155 bp

Guanine Count

1556119 bp

Cytosine Count

1540744 bp

Genome Length

5748059 bp

Protein-coding Genes

5076 genes

Non-Coding Genes

278 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
stress adaptor protein cpxpPRCB_12460Not AvailableNegative2554843 - 255535519272.9
dna-binding response regulatorPRCB_12465Not AvailablePositive2555506 - 255620426554.0
two-component system sensor histidine kinase cpxaPRCB_12470Not AvailablePositive2556201 - 255757751816.6
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlPRCB_12475Not AvailablePositive2557613 - 255808617547.2
serine o-acetyltransferasePRCB_12480Not AvailableNegative2558083 - 255889829195.3
nad(p)h-dependent glycerol-3-phosphate dehydrogenasePRCB_12485Not AvailableNegative2558966 - 255998535989.4
protein-export chaperone secbPRCB_12490Not AvailableNegative2559985 - 256044917203.2
glutaredoxin 3PRCB_12495Not AvailableNegative2560489 - 25607439305.16
rhodanese-like domain-containing proteinPRCB_12500Not AvailableNegative2560761 - 256119215261.5
murein hydrolase activator envcPRCB_12505Not AvailablePositive2561442 - 256274348061.3

Displaying genes 2531 – 2540 of 5354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.