Pantoea rodasii str. DSM 26611

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea rodasii strain DSM 26611 is a notable bacterium characterized by its possession of flagella, which indicates motility and potential adaptability to various environments. This trait may play a significant role in its ecological interactions and survival strategies, as flagella allow for movement toward favorable conditions and away from adverse ones. The strain is defined by a single replicon, which suggests a streamlined genomic structure. This can impact its replication strategy and overall metabolic efficiency, potentially influencing its growth rate and adaptability to different substrates in its environment. The genomic information is accessible under the accession number PIQI00000000.1, providing a resource for further genetic and functional studies. Understanding the traits of Pantoea rodasii DSM 26611 contributes to the broader knowledge of the Pantoea genus, which is known for its diverse ecological roles, including plant growth promotion and biocontrol. The presence of flagella and the genomic structure may allow this strain to thrive in specific niches, where it can interact with plant hosts or compete with other microorganisms. This adaptability could be significant in agricultural contexts, where Pantoea species are explored for their beneficial traits. Thus, the characteristics of Pantoea rodasii DSM 26611 underline its potential as an organism of interest for ecological research and practical applications in crop management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea rodasii
StrainDSM 26611

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea rodasii strain DSM 26611 PRCB31, whole genome shotgun

Gene Summary

Adenine Count

1327041 bp

Thymine Count

1324155 bp

Guanine Count

1556119 bp

Cytosine Count

1540744 bp

Genome Length

5748059 bp

Protein-coding Genes

5076 genes

Non-Coding Genes

278 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xylose isomerasePRCB_10080Not AvailableNegative2082491 - 208381349817.7
d-xylose abc transporter substrate-binding proteinPRCB_10085Not AvailablePositive2084110 - 208510235686.9
d-xylose abc transporter atp-binding proteinPRCB_10090Not AvailablePositive2085129 - 208664955776.1
sugar abc transporter permeasePRCB_10095Not AvailablePositive2086642 - 208781440997.5
xylr family transcriptional regulatorPRCB_10100Not AvailablePositive2087908 - 208908644918.8
Trna-sec(p)Not AvailableNot AvailablePositive2089148 - 2089238Not Available
arac family transcriptional regulatorPRCB_10110Not AvailablePositive2089506 - 209035731121.2
arac family transcriptional regulatorPRCB_10115Not AvailableNegative2090311 - 209070915399.8
duf1360 domain-containing proteinPRCB_10120Not AvailablePositive2090916 - 209128113444.8
transcriptional regulatorPRCB_10125Not AvailableNegative2091278 - 209174817121.8

Displaying genes 2091 – 2100 of 5354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.