Pantoea rodasii str. DSM 26611

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea rodasii strain DSM 26611 is a notable bacterium characterized by its possession of flagella, which indicates motility and potential adaptability to various environments. This trait may play a significant role in its ecological interactions and survival strategies, as flagella allow for movement toward favorable conditions and away from adverse ones. The strain is defined by a single replicon, which suggests a streamlined genomic structure. This can impact its replication strategy and overall metabolic efficiency, potentially influencing its growth rate and adaptability to different substrates in its environment. The genomic information is accessible under the accession number PIQI00000000.1, providing a resource for further genetic and functional studies. Understanding the traits of Pantoea rodasii DSM 26611 contributes to the broader knowledge of the Pantoea genus, which is known for its diverse ecological roles, including plant growth promotion and biocontrol. The presence of flagella and the genomic structure may allow this strain to thrive in specific niches, where it can interact with plant hosts or compete with other microorganisms. This adaptability could be significant in agricultural contexts, where Pantoea species are explored for their beneficial traits. Thus, the characteristics of Pantoea rodasii DSM 26611 underline its potential as an organism of interest for ecological research and practical applications in crop management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea rodasii
StrainDSM 26611

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea rodasii strain DSM 26611 PRCB31, whole genome shotgun

Gene Summary

Adenine Count

1327041 bp

Thymine Count

1324155 bp

Guanine Count

1556119 bp

Cytosine Count

1540744 bp

Genome Length

5748059 bp

Protein-coding Genes

5076 genes

Non-Coding Genes

278 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid iii flippase wzxePRCB_09575Not AvailableNegative1959781 - 196103445557.9
dtdp-4-amino-4,6-dideoxygalactose transaminasePRCB_09580Not AvailableNegative1961034 - 196216442188.7
dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferasePRCB_09585Not AvailableNegative1962164 - 196285925974.7
udp-n-acetyl-d-mannosamine dehydrogenasePRCB_09590Not AvailableNegative1962878 - 196413745679.1
udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing)PRCB_09595Not AvailableNegative1964140 - 196526441892.5
eca polysaccharide chain length modulation proteinPRCB_09600Not AvailableNegative1965275 - 196632439417.0
undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferasePRCB_09605Not AvailableNegative1966361 - 196743739445.9
transcription termination factor rhoPRCB_09610Not AvailableNegative1967716 - 196897547111.1
thioredoxin trxaPRCB_09615Not AvailableNegative1969321 - 196965311883.2
atp-dependent rna helicase rhlbPRCB_09620Not AvailablePositive1969770 - 197106547973.2

Displaying genes 1991 – 2000 of 5354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.