Catalinimonas alkaloidigena

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Catalimonadaceae

Genus

Catalinimonas

Description

Catalinimonas alkaloidigena is a bacterial species characterized by having a single replicon. The genomic data for this organism is cataloged under the accession number FNFO00000000.1. This suggests that the organism has a streamlined genetic architecture, which may influence its metabolic capabilities and adaptability. The designation of "alkaloidigena" in its name indicates a potential association with alkaloid production, which are diverse secondary metabolites known for their ecological roles, including defense mechanisms in various environments. While specific details about its ecological niche are not provided, the ability to produce alkaloids may suggest that C. alkaloidigena could play a role in interactions with other organisms, possibly contributing to the microbial community dynamics. Understanding the genetic structure and potential metabolic pathways of Catalinimonas alkaloidigena can provide insights into its function within its ecosystem. The presence of a single replicon may suggest a relatively simple regulatory mechanism, which can affect growth rates and responses to environmental stressors. The ecological implications of its alkaloid production could be significant, potentially influencing nutrient cycling, plant-microbe interactions, or competition with other microbial species. Further studies on C. alkaloidigena could elucidate its ecological roles and contributions to its habitat, particularly in environments where alkaloids play a crucial part in biological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCatalimonadaceae
GenusCatalinimonas
SpeciesCatalinimonas alkaloidigena
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Catalinimonas alkaloidigena


Gene Summary

Adenine Count

1540036 bp

Thymine Count

1547171 bp

Guanine Count

2014654 bp

Cytosine Count

2005230 bp

Genome Length

7107765 bp

Protein-coding Genes

5676 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized protein containing a zn-ribbonSAMN05421823_11240Not AvailablePositive6021659 - 602207516394.7
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN05421823_11241Not AvailableNegative6022403 - 602303223301.9
glycosyltransferase sugar-binding region containing dxd motif-containing proteinSAMN05421823_11242Not AvailableNegative6023134 - 602397933261.4
solute:na+ symporter, sss familySAMN05421823_11243Not AvailableNegative6024291 - 602590758968.1
l-ribulose-5-phosphate 4-epimeraseSAMN05421823_11244Not AvailableNegative6025947 - 602664826087.1
alpha-n-arabinofuranosidaseSAMN05421823_11245Not AvailableNegative6026749 - 602828457143.9
l-arabinose isomeraseSAMN05421823_11246Not AvailableNegative6028408 - 602989856074.5
hypothetical proteinSAMN05421823_11247Not AvailableNegative6029979 - 60301496258.67
l-ribulokinaseSAMN05421823_11248Not AvailableNegative6030149 - 603178359402.7
rna polymerase sigma-70 factor, ecf subfamilySAMN05421823_11249Not AvailablePositive6032180 - 603279123815.9

Displaying genes 4841 – 4850 of 5722 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.