Catalinimonas alkaloidigena

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Catalimonadaceae

Genus

Catalinimonas

Description

Catalinimonas alkaloidigena is a bacterial species characterized by having a single replicon. The genomic data for this organism is cataloged under the accession number FNFO00000000.1. This suggests that the organism has a streamlined genetic architecture, which may influence its metabolic capabilities and adaptability. The designation of "alkaloidigena" in its name indicates a potential association with alkaloid production, which are diverse secondary metabolites known for their ecological roles, including defense mechanisms in various environments. While specific details about its ecological niche are not provided, the ability to produce alkaloids may suggest that C. alkaloidigena could play a role in interactions with other organisms, possibly contributing to the microbial community dynamics. Understanding the genetic structure and potential metabolic pathways of Catalinimonas alkaloidigena can provide insights into its function within its ecosystem. The presence of a single replicon may suggest a relatively simple regulatory mechanism, which can affect growth rates and responses to environmental stressors. The ecological implications of its alkaloid production could be significant, potentially influencing nutrient cycling, plant-microbe interactions, or competition with other microbial species. Further studies on C. alkaloidigena could elucidate its ecological roles and contributions to its habitat, particularly in environments where alkaloids play a crucial part in biological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCatalimonadaceae
GenusCatalinimonas
SpeciesCatalinimonas alkaloidigena
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Catalinimonas alkaloidigena strain DSM 25186 genome assembly,

Gene Summary

Adenine Count

1540036 bp

Thymine Count

1547171 bp

Guanine Count

2014654 bp

Cytosine Count

2005230 bp

Genome Length

7107765 bp

Protein-coding Genes

5676 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transglutaminase-like superfamily proteinSAMN05421823_11029Not AvailablePositive5333892 - 533645698058.1
hypothetical proteinSAMN05421823_11030Not AvailableNegative5336514 - 533695115958.3
lysm domain-containing proteinSAMN05421823_11031Not AvailablePositive5337066 - 533745214126.8
protein of unknown functionSAMN05421823_11032Not AvailablePositive5337704 - 533819518261.7
hypothetical proteinSAMN05421823_11033Not AvailableNegative5338196 - 53383816716.58
aspartate-semialdehyde dehydrogenaseSAMN05421823_11034Not AvailableNegative5338480 - 533948736478.0
lamin tail domainSAMN05421823_11035Not AvailablePositive5339541 - 534213594466.6
dolichyl-phosphate-mannose-protein mannosyltransferaseSAMN05421823_11036Not AvailablePositive5342139 - 534371659152.2
beta-aspartyl-peptidase (threonine type)SAMN05421823_11037Not AvailableNegative5343721 - 534472535976.8
rna polymerase-binding protein dksaSAMN05421823_11038Not AvailablePositive5345016 - 534540214867.8

Displaying genes 4311 – 4320 of 5722 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.