Catalinimonas alkaloidigena

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Catalimonadaceae

Genus

Catalinimonas

Description

Catalinimonas alkaloidigena is a bacterial species characterized by having a single replicon. The genomic data for this organism is cataloged under the accession number FNFO00000000.1. This suggests that the organism has a streamlined genetic architecture, which may influence its metabolic capabilities and adaptability. The designation of "alkaloidigena" in its name indicates a potential association with alkaloid production, which are diverse secondary metabolites known for their ecological roles, including defense mechanisms in various environments. While specific details about its ecological niche are not provided, the ability to produce alkaloids may suggest that C. alkaloidigena could play a role in interactions with other organisms, possibly contributing to the microbial community dynamics. Understanding the genetic structure and potential metabolic pathways of Catalinimonas alkaloidigena can provide insights into its function within its ecosystem. The presence of a single replicon may suggest a relatively simple regulatory mechanism, which can affect growth rates and responses to environmental stressors. The ecological implications of its alkaloid production could be significant, potentially influencing nutrient cycling, plant-microbe interactions, or competition with other microbial species. Further studies on C. alkaloidigena could elucidate its ecological roles and contributions to its habitat, particularly in environments where alkaloids play a crucial part in biological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCatalimonadaceae
GenusCatalinimonas
SpeciesCatalinimonas alkaloidigena
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Catalinimonas alkaloidigena strain DSM 25186 genome assembly,

Gene Summary

Adenine Count

1540036 bp

Thymine Count

1547171 bp

Guanine Count

2014654 bp

Cytosine Count

2005230 bp

Genome Length

7107765 bp

Protein-coding Genes

5676 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN05421823_106226Not AvailablePositive4157445 - 415801121704.2
short-chain dehydrogenaseSAMN05421823_106227Not AvailablePositive4158090 - 415882726468.3
dna-binding transcriptional regulator, acrr familySAMN05421823_106228Not AvailablePositive4158995 - 415955820993.4
pimeloyl-acp methyl ester carboxylesteraseSAMN05421823_106229Not AvailablePositive4159664 - 416053033367.1
l-rhamnose isomerase / sugar isomeraseSAMN05421823_106230Not AvailableNegative4160718 - 416199847722.6
rhamnulose-1-phosphate aldolase/alcohol dehydrogenaseSAMN05421823_106231Not AvailableNegative4162086 - 416420977289.0
polyhydroxybutyrate depolymeraseSAMN05421823_106232Not AvailableNegative4164608 - 416576542017.4
lysophospholipase, alpha-beta hydrolase superfamilySAMN05421823_106233Not AvailablePositive4165918 - 416670329164.0
hypothetical proteinSAMN05421823_106234Not AvailablePositive4167009 - 41672158029.45
helix-turn-helix domain-containing proteinSAMN05421823_106235Not AvailableNegative4167283 - 416818835465.3

Displaying genes 3351 – 3360 of 5722 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.