Riemerella columbipharyngis

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Riemerella columbipharyngis is a Gram-negative, non-motile rod-shaped bacterium that exhibits microaerophilic growth characteristics. This organism thrives optimally at a temperature of 37°C, indicating its mesophilic nature, which is typical of many pathogenic and commensal microorganisms found in warm-blooded hosts. Riemerella columbipharyngis has a single replicon and is characterized as non-spore-forming. The microaerophilic requirement suggests that Riemerella columbipharyngis may inhabit environments with limited oxygen availability, which is often the case in certain niches within host organisms, such as the respiratory tracts of birds, where it is primarily found. The bacterium's ability to thrive under these conditions may contribute to its ecological role as a commensal or potential pathogen in avian species. Understanding the growth characteristics and environmental preferences of Riemerella columbipharyngis can provide insights into its ecological interactions and potential impacts on avian health. By studying its behavior in relation to other microorganisms and the host environment, researchers can better grasp the dynamics of microbial communities and the role of Riemerella columbipharyngis within them. The accession number for this bacterium is FNAS00000000.1, which can be used for further research and exploration of its genomic and phenotypic traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella columbipharyngis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella columbipharyngis strain DSM 24015 genome assembly,

Gene Summary

Adenine Count

677005 bp

Thymine Count

678325 bp

Guanine Count

397688 bp

Cytosine Count

383926 bp

Genome Length

2136954 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05421544_10510Not AvailableNegative849630 - 84998612936.6
por secretion system c-terminal sorting domain-containing proteinSAMN05421544_10511Not AvailableNegative850006 - 85194372019.6
glycosyltransferase involved in cell wall bisynthesisSAMN05421544_10512Not AvailableNegative852163 - 85323341127.1
formyl transferaseSAMN05421544_10513Not AvailableNegative853239 - 85398829017.7
polysaccharide deacetylaseSAMN05421544_10514Not AvailableNegative853999 - 85498539188.8
atp-dependent dna helicase recqSAMN05421544_10515Not AvailableNegative855004 - 85723884051.3
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) componentSAMN05421544_10516Not AvailablePositive857518 - 85885549004.2
hypothetical proteinSAMN05421544_10517Not AvailablePositive859035 - 861848109560.0
outer membrane protein beta-barrel domain-containing proteinSAMN05421544_10518Not AvailableNegative862510 - 86317524797.2
succinyl-coa synthetase alpha subunitSAMN05421544_10519Not AvailableNegative863251 - 86412329760.1

Displaying genes 921 – 930 of 2189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.