Riemerella columbipharyngis

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Riemerella columbipharyngis is a Gram-negative, non-motile rod-shaped bacterium that exhibits microaerophilic growth characteristics. This organism thrives optimally at a temperature of 37°C, indicating its mesophilic nature, which is typical of many pathogenic and commensal microorganisms found in warm-blooded hosts. Riemerella columbipharyngis has a single replicon and is characterized as non-spore-forming. The microaerophilic requirement suggests that Riemerella columbipharyngis may inhabit environments with limited oxygen availability, which is often the case in certain niches within host organisms, such as the respiratory tracts of birds, where it is primarily found. The bacterium's ability to thrive under these conditions may contribute to its ecological role as a commensal or potential pathogen in avian species. Understanding the growth characteristics and environmental preferences of Riemerella columbipharyngis can provide insights into its ecological interactions and potential impacts on avian health. By studying its behavior in relation to other microorganisms and the host environment, researchers can better grasp the dynamics of microbial communities and the role of Riemerella columbipharyngis within them. The accession number for this bacterium is FNAS00000000.1, which can be used for further research and exploration of its genomic and phenotypic traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella columbipharyngis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella columbipharyngis strain DSM 24015 genome assembly,

Gene Summary

Adenine Count

677005 bp

Thymine Count

678325 bp

Guanine Count

397688 bp

Cytosine Count

383926 bp

Genome Length

2136954 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05421544_10191Not AvailablePositive108272 - 10883220984.0
phage shock protein pspc (stress-responsive transcriptional regulator)SAMN05421544_10192Not AvailableNegative108911 - 11056662264.1
padr family transcriptional regulator, regulatory protein padrSAMN05421544_10193Not AvailableNegative110571 - 11090312820.6
outer membrane protein beta-barrel family proteinSAMN05421544_10194Not AvailableNegative110977 - 11304979023.0
nitroreductaseSAMN05421544_10195Not AvailablePositive113315 - 11394423789.5
hypothetical proteinSAMN05421544_10196Not AvailablePositive114110 - 11502434403.1
rnase hiiSAMN05421544_10197Not AvailableNegative115099 - 11569222808.6
tonb-linked outer membrane protein, susc/raga familySAMN05421544_10198Not AvailablePositive115817 - 118816109672.0
starch-binding associating with outer membraneSAMN05421544_10199Not AvailablePositive118820 - 12027153809.0
arginyl-trna synthetaseSAMN05421544_101100Not AvailablePositive120349 - 12211267377.7

Displaying genes 231 – 240 of 2189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.