Riemerella columbipharyngis

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Riemerella columbipharyngis is a Gram-negative, non-motile rod-shaped bacterium that exhibits microaerophilic growth characteristics. This organism thrives optimally at a temperature of 37°C, indicating its mesophilic nature, which is typical of many pathogenic and commensal microorganisms found in warm-blooded hosts. Riemerella columbipharyngis has a single replicon and is characterized as non-spore-forming. The microaerophilic requirement suggests that Riemerella columbipharyngis may inhabit environments with limited oxygen availability, which is often the case in certain niches within host organisms, such as the respiratory tracts of birds, where it is primarily found. The bacterium's ability to thrive under these conditions may contribute to its ecological role as a commensal or potential pathogen in avian species. Understanding the growth characteristics and environmental preferences of Riemerella columbipharyngis can provide insights into its ecological interactions and potential impacts on avian health. By studying its behavior in relation to other microorganisms and the host environment, researchers can better grasp the dynamics of microbial communities and the role of Riemerella columbipharyngis within them. The accession number for this bacterium is FNAS00000000.1, which can be used for further research and exploration of its genomic and phenotypic traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella columbipharyngis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella columbipharyngis strain DSM 24015 genome assembly,

Gene Summary

Adenine Count

677005 bp

Thymine Count

678325 bp

Guanine Count

397688 bp

Cytosine Count

383926 bp

Genome Length

2136954 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonuclease/exonuclease/phosphatase family proteinSAMN05421544_10181Not AvailablePositive97154 - 9834745403.9
protein of unknown functionSAMN05421544_10182Not AvailableNegative98417 - 9931634572.0
flagellum-specific peptidoglycan hydrolase flgjSAMN05421544_10183Not AvailablePositive99504 - 9997717822.8
fructose-bisphosphate aldolase, class iSAMN05421544_10184Not AvailableNegative100062 - 10112037974.5
ligand-gated ion channelSAMN05421544_10185Not AvailablePositive101442 - 10253341713.6
protein-l-isoaspartate(d-aspartate) o-methyltransferaseSAMN05421544_10186Not AvailablePositive102570 - 10322024482.0
acyl-coa hydrolaseSAMN05421544_10187Not AvailablePositive104071 - 10535146945.5
isochorismate synthaseSAMN05421544_10188Not AvailableNegative105852 - 10682937655.4
1,4-dihydroxy-2-naphthoyl-coa hydrolaseSAMN05421544_10189Not AvailableNegative106829 - 10725115651.7
acyltransferaseSAMN05421544_10190Not AvailableNegative107268 - 10784021713.7

Displaying genes 221 – 230 of 2189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.