Riemerella columbipharyngis

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Riemerella columbipharyngis is a Gram-negative, non-motile rod-shaped bacterium that exhibits microaerophilic growth characteristics. This organism thrives optimally at a temperature of 37°C, indicating its mesophilic nature, which is typical of many pathogenic and commensal microorganisms found in warm-blooded hosts. Riemerella columbipharyngis has a single replicon and is characterized as non-spore-forming. The microaerophilic requirement suggests that Riemerella columbipharyngis may inhabit environments with limited oxygen availability, which is often the case in certain niches within host organisms, such as the respiratory tracts of birds, where it is primarily found. The bacterium's ability to thrive under these conditions may contribute to its ecological role as a commensal or potential pathogen in avian species. Understanding the growth characteristics and environmental preferences of Riemerella columbipharyngis can provide insights into its ecological interactions and potential impacts on avian health. By studying its behavior in relation to other microorganisms and the host environment, researchers can better grasp the dynamics of microbial communities and the role of Riemerella columbipharyngis within them. The accession number for this bacterium is FNAS00000000.1, which can be used for further research and exploration of its genomic and phenotypic traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella columbipharyngis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella columbipharyngis strain DSM 24015 genome assembly,

Gene Summary

Adenine Count

677005 bp

Thymine Count

678325 bp

Guanine Count

397688 bp

Cytosine Count

383926 bp

Genome Length

2136954 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna mismatch repair protein mutlSAMN05421544_11153Not AvailablePositive1467445 - 146922368267.6
membrane associated serine protease, rhomboid familySAMN05421544_11154Not AvailablePositive1469226 - 146995127411.1
uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamilySAMN05421544_11155Not AvailablePositive1470003 - 147093235444.1
proton-dependent oligopeptide transporter, pot familySAMN05421544_11156Not AvailablePositive1471100 - 147258154543.8
dipeptide/tripeptide permeaseSAMN05421544_11157Not AvailablePositive1472734 - 147424856504.9
proton-dependent oligopeptide transporter, pot familySAMN05421544_11158Not AvailablePositive1474275 - 147583758153.0
thioredoxin-like domain-containing proteinSAMN05421544_11159Not AvailablePositive1475851 - 147639620728.1
acyl-coa thioester hydrolaseSAMN05421544_11160Not AvailablePositive1476422 - 147691019308.2
dtdp-4-dehydrorhamnose reductaseSAMN05421544_11161Not AvailablePositive1476903 - 147776632570.7
hypothetical proteinSAMN05421544_11162Not AvailableNegative1477803 - 14780217832.84

Displaying genes 1551 – 1560 of 2189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.