Riemerella columbipharyngis

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Riemerella columbipharyngis is a Gram-negative, non-motile rod-shaped bacterium that exhibits microaerophilic growth characteristics. This organism thrives optimally at a temperature of 37°C, indicating its mesophilic nature, which is typical of many pathogenic and commensal microorganisms found in warm-blooded hosts. Riemerella columbipharyngis has a single replicon and is characterized as non-spore-forming. The microaerophilic requirement suggests that Riemerella columbipharyngis may inhabit environments with limited oxygen availability, which is often the case in certain niches within host organisms, such as the respiratory tracts of birds, where it is primarily found. The bacterium's ability to thrive under these conditions may contribute to its ecological role as a commensal or potential pathogen in avian species. Understanding the growth characteristics and environmental preferences of Riemerella columbipharyngis can provide insights into its ecological interactions and potential impacts on avian health. By studying its behavior in relation to other microorganisms and the host environment, researchers can better grasp the dynamics of microbial communities and the role of Riemerella columbipharyngis within them. The accession number for this bacterium is FNAS00000000.1, which can be used for further research and exploration of its genomic and phenotypic traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella columbipharyngis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella columbipharyngis strain DSM 24015 genome assembly,

Gene Summary

Adenine Count

677005 bp

Thymine Count

678325 bp

Guanine Count

397688 bp

Cytosine Count

383926 bp

Genome Length

2136954 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (guanine527-n7)-methyltransferaseSAMN05421544_11031Not AvailableNegative1356735 - 135737023568.7
udp-glucose 4-epimeraseSAMN05421544_11032Not AvailableNegative1357371 - 135839938410.0
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN05421544_11033Not AvailableNegative1358412 - 135953942617.1
peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin familySAMN05421544_11034Not AvailablePositive1359975 - 136105739764.9
dinuclear metal center protein, ybgi/sa1388 familySAMN05421544_11035Not AvailablePositive1361153 - 136225040808.0
hypothetical proteinSAMN05421544_11036Not AvailablePositive1362255 - 136303430196.0
dipeptidyl aminopeptidase/acylaminoacyl peptidaseSAMN05421544_11037Not AvailablePositive1363108 - 136510875738.9
polyisoprenoid-binding protein yceiSAMN05421544_11038Not AvailableNegative1365177 - 136574921010.5
Trna-leuNot AvailableNot AvailablePositive1365867 - 1365953Not Available
Trna-glyNot AvailableNot AvailablePositive1365990 - 1366065Not Available

Displaying genes 1461 – 1470 of 2189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.