Geodermatophilus nigrescens

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus nigrescens is a species of bacteria characterized by its cocci shape and the presence of flagella, which are structures that facilitate motility. This bacterium contains a single replicon, indicating that it has a straightforward genomic structure. The genomic sequence of G. nigrescens is documented under the accession number FQVX00000000.1. As a member of the Geodermatophilus genus, this species is likely to inhabit soil environments, particularly those that are arid or semi-arid. The presence of flagella suggests an adaptation that may enhance its ability to navigate through its environment, possibly aiding in the colonization of various substrates or in the search for nutrients. The ecological role of Geodermatophilus nigrescens may include contributions to soil health and nutrient cycling, as many soil-dwelling bacteria play crucial roles in decomposing organic matter and facilitating nutrient availability for plants. The specific adaptations of G. nigrescens, such as its motility and cocci morphology, may allow it to thrive in competitive environments where resources are limited. Understanding the traits of Geodermatophilus nigrescens can provide insights into its ecological significance and potential applications in biotechnology or bioremediation due to its soil-dwelling nature.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus nigrescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus nigrescens strain DSM 45408 genome assembly,

Gene Summary

Adenine Count

570289 bp

Thymine Count

574287 bp

Guanine Count

1794281 bp

Cytosine Count

1801607 bp

Genome Length

4740866 bp

Protein-coding Genes

4571 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05444351_4001Not AvailablePositive4048707 - 405080675605.5
uncharacterized proteinSAMN05444351_4002Not AvailablePositive4050829 - 405170430523.9
hypothetical proteinSAMN05444351_4003Not AvailablePositive4051754 - 40519908263.8
anti-sigma regulatory factor (ser/thr protein kinase)SAMN05444351_4004Not AvailableNegative4052008 - 405250517921.3
gaf domain-containing proteinSAMN05444351_4005Not AvailablePositive4052632 - 405336325704.3
pyrimidine-specific ribonucleoside hydrolaseSAMN05444351_4006Not AvailableNegative4053326 - 405427631985.2
dna-binding transcriptional regulator, lysr familySAMN05444351_4007Not AvailableNegative4054348 - 405526831363.1
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN05444351_4008Not AvailablePositive4055355 - 405618529473.6
glutathione synthase/rimk-type ligase, atp-grasp superfamilySAMN05444351_4009Not AvailablePositive4056313 - 405718830669.1
amino acid/polyamine/organocation transporter, apc superfamilySAMN05444351_4010Not AvailableNegative4057169 - 405858448464.0

Displaying genes 3951 – 3960 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.