Geodermatophilus nigrescens

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus nigrescens is a species of bacteria characterized by its cocci shape and the presence of flagella, which are structures that facilitate motility. This bacterium contains a single replicon, indicating that it has a straightforward genomic structure. The genomic sequence of G. nigrescens is documented under the accession number FQVX00000000.1. As a member of the Geodermatophilus genus, this species is likely to inhabit soil environments, particularly those that are arid or semi-arid. The presence of flagella suggests an adaptation that may enhance its ability to navigate through its environment, possibly aiding in the colonization of various substrates or in the search for nutrients. The ecological role of Geodermatophilus nigrescens may include contributions to soil health and nutrient cycling, as many soil-dwelling bacteria play crucial roles in decomposing organic matter and facilitating nutrient availability for plants. The specific adaptations of G. nigrescens, such as its motility and cocci morphology, may allow it to thrive in competitive environments where resources are limited. Understanding the traits of Geodermatophilus nigrescens can provide insights into its ecological significance and potential applications in biotechnology or bioremediation due to its soil-dwelling nature.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus nigrescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus nigrescens strain DSM 45408 genome assembly,

Gene Summary

Adenine Count

570289 bp

Thymine Count

574287 bp

Guanine Count

1794281 bp

Cytosine Count

1801607 bp

Genome Length

4740866 bp

Protein-coding Genes

4571 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseSAMN05444351_3991Not AvailableNegative4036161 - 403695526960.2
high-affinity iron transporterSAMN05444351_3992Not AvailablePositive4037097 - 403799931422.6
iron uptake system component efeoSAMN05444351_3993Not AvailablePositive4037986 - 403914640697.7
deferrochelatase/peroxidase efebSAMN05444351_3994Not AvailablePositive4039229 - 404053945828.6
serine/threonine protein kinaseSAMN05444351_3995Not AvailablePositive4040743 - 404246157491.3
serine/threonine protein kinaseSAMN05444351_3996Not AvailablePositive4042477 - 404400950846.8
hypothetical proteinSAMN05444351_3997Not AvailableNegative4044043 - 404489127597.6
competence/damage-inducible protein cinaSAMN05444351_3998Not AvailablePositive4045045 - 404632843646.4
polyketide cyclase / dehydrase and lipid transportSAMN05444351_3999Not AvailablePositive4046345 - 404674014042.1
putative acyl-coa dehydrogenaseSAMN05444351_4000Not AvailablePositive4046941 - 404857857150.2

Displaying genes 3941 – 3950 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.