Geodermatophilus nigrescens

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus nigrescens is a species of bacteria characterized by its cocci shape and the presence of flagella, which are structures that facilitate motility. This bacterium contains a single replicon, indicating that it has a straightforward genomic structure. The genomic sequence of G. nigrescens is documented under the accession number FQVX00000000.1. As a member of the Geodermatophilus genus, this species is likely to inhabit soil environments, particularly those that are arid or semi-arid. The presence of flagella suggests an adaptation that may enhance its ability to navigate through its environment, possibly aiding in the colonization of various substrates or in the search for nutrients. The ecological role of Geodermatophilus nigrescens may include contributions to soil health and nutrient cycling, as many soil-dwelling bacteria play crucial roles in decomposing organic matter and facilitating nutrient availability for plants. The specific adaptations of G. nigrescens, such as its motility and cocci morphology, may allow it to thrive in competitive environments where resources are limited. Understanding the traits of Geodermatophilus nigrescens can provide insights into its ecological significance and potential applications in biotechnology or bioremediation due to its soil-dwelling nature.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus nigrescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus nigrescens strain DSM 45408 genome assembly,

Gene Summary

Adenine Count

570289 bp

Thymine Count

574287 bp

Guanine Count

1794281 bp

Cytosine Count

1801607 bp

Genome Length

4740866 bp

Protein-coding Genes

4571 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05444351_0260Not AvailablePositive245031 - 24610734589.7
transcriptional regulator, marr familySAMN05444351_0261Not AvailablePositive246133 - 24663017871.5
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN05444351_0262Not AvailablePositive246762 - 24825252917.3
adp-heptose:lps heptosyltransferaseSAMN05444351_0263Not AvailablePositive248249 - 24928334811.7
glycosyl transferases group 1SAMN05444351_0264Not AvailablePositive249280 - 25027236505.3
glycosyltransferase involved in cell wall bisynthesisSAMN05444351_0265Not AvailablePositive250269 - 25151343558.2
d-sedoheptulose 7-phosphate isomeraseSAMN05444351_0266Not AvailablePositive251534 - 25221423375.5
rfae bifunctional protein, domain i/rfae bifunctional protein, domain iiSAMN05444351_0267Not AvailablePositive252211 - 25357545626.4
adp-heptose:lps heptosyltransferaseSAMN05444351_0268Not AvailablePositive253572 - 25456134049.9
von willebrand factor type a domain-containing proteinSAMN05444351_0269Not AvailableNegative254680 - 25632656144.4

Displaying genes 231 – 240 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.