Geodermatophilus nigrescens

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus nigrescens is a species of bacteria characterized by its cocci shape and the presence of flagella, which are structures that facilitate motility. This bacterium contains a single replicon, indicating that it has a straightforward genomic structure. The genomic sequence of G. nigrescens is documented under the accession number FQVX00000000.1. As a member of the Geodermatophilus genus, this species is likely to inhabit soil environments, particularly those that are arid or semi-arid. The presence of flagella suggests an adaptation that may enhance its ability to navigate through its environment, possibly aiding in the colonization of various substrates or in the search for nutrients. The ecological role of Geodermatophilus nigrescens may include contributions to soil health and nutrient cycling, as many soil-dwelling bacteria play crucial roles in decomposing organic matter and facilitating nutrient availability for plants. The specific adaptations of G. nigrescens, such as its motility and cocci morphology, may allow it to thrive in competitive environments where resources are limited. Understanding the traits of Geodermatophilus nigrescens can provide insights into its ecological significance and potential applications in biotechnology or bioremediation due to its soil-dwelling nature.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus nigrescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus nigrescens strain DSM 45408 genome assembly,

Gene Summary

Adenine Count

570289 bp

Thymine Count

574287 bp

Guanine Count

1794281 bp

Cytosine Count

1801607 bp

Genome Length

4740866 bp

Protein-coding Genes

4571 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogen fixation protein nifuSAMN05444351_2339Not AvailableNegative2331207 - 233167416612.6
cysteine desulfurase / selenocysteine lyaseSAMN05444351_2340Not AvailableNegative2331674 - 233300247309.3
fe-s cluster assembly atp-binding proteinSAMN05444351_2341Not AvailableNegative2332999 - 233377227903.4
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunitSAMN05444351_2342Not AvailableNegative2333788 - 233414112588.6
iron-regulated abc transporter permease protein sufdSAMN05444351_2343Not AvailableNegative2334145 - 233546445676.3
iron-regulated abc transporter membrane component sufbSAMN05444351_2344Not AvailableNegative2335464 - 233690653523.1
predicted transcriptional regulator, arsr familySAMN05444351_2345Not AvailableNegative2336903 - 233769427307.1
atp-dependent clp protease atp-binding subunit clpcSAMN05444351_2346Not AvailableNegative2337834 - 234037492512.3
cytochrome c oxidase assembly protein subunit 15SAMN05444351_2347Not AvailablePositive2340574 - 234151832913.7
hypothetical proteinSAMN05444351_2348Not AvailableNegative2341615 - 234260433376.7

Displaying genes 2301 – 2310 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.