Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | AMETH_RS04015 | Not Available | Positive | 809608 - 810636 | 37924.2 |
| inner membrane protein yhjd | AMETH_RS04020 | Not Available | Positive | 810702 - 811706 | 35533.8 |
| d-alanyl-d-alanine carboxypeptidase family protein | AMETH_RS04025 | Not Available | Negative | 811852 - 813003 | 39279.1 |
| sco4848 family membrane protein | AMETH_RS04030 | Not Available | Positive | 813128 - 813367 | 8979.06 |
| hypothetical protein | AMETH_RS41190 | Not Available | Negative | 813546 - 814160 | 20974.4 |
| hypothetical protein | AMETH_RS39620 | Not Available | Negative | 814464 - 814613 | 5172.23 |
| hypothetical protein | AMETH_RS39625 | Not Available | Positive | 815034 - 815420 | 13286.6 |
| succinate dehydrogenase iron-sulfur subunit | AMETH_RS04040 | Not Available | Negative | 815475 - 816248 | 28722.2 |
| succinate dehydrogenase flavoprotein subunit | AMETH_RS04045 | Not Available | Negative | 816250 - 818037 | 65398.8 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | AMETH_RS04050 | Not Available | Negative | 818066 - 818485 | 15935.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
