Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | AMETH_RS03965 | Not Available | Positive | 802175 - 803398 | 45433.1 |
| hypothetical protein | AMETH_RS03970 | Not Available | Positive | 803768 - 804226 | 16320.3 |
| sh3 domain-containing protein | AMETH_RS03975 | Not Available | Positive | 804236 - 804550 | 10798.0 |
| mbl fold metallo-hydrolase | AMETH_RS03980 | Not Available | Negative | 804553 - 805290 | 26006.0 |
| exodeoxyribonuclease iii | AMETH_RS03985 | Not Available | Positive | 805329 - 806144 | 29679.8 |
| duf6247 family protein | AMETH_RS03990 | Not Available | Positive | 806464 - 806748 | 10201.0 |
| type ii toxin-antitoxin system rele/pare family toxin | AMETH_RS03995 | Not Available | Positive | 806745 - 807104 | 13139.5 |
| hypothetical protein | AMETH_RS04000 | Not Available | Positive | 807333 - 807620 | 9678.98 |
| tdt family transporter | AMETH_RS04005 | Not Available | Negative | 807599 - 808627 | 35608.4 |
| lysr family transcriptional regulator | AMETH_RS04010 | Not Available | Positive | 808698 - 809594 | 30976.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
