Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMETH_RS03665 | Not Available | Positive | 737481 - 738077 | 21229.6 |
| sigma-70 family rna polymerase sigma factor | AMETH_RS03670 | Not Available | Positive | 738330 - 738902 | 20487.5 |
| anti-sigma-d factor rsda | AMETH_RS03675 | Not Available | Positive | 738903 - 739829 | 32031.6 |
| duf5319 domain-containing protein | AMETH_RS03680 | Not Available | Negative | 739942 - 740331 | 14286.5 |
| imp dehydrogenase | AMETH_RS03685 | Not Available | Positive | 740504 - 742006 | 52311.0 |
| guab3 family imp dehydrogenase-related protein | AMETH_RS03690 | Not Available | Positive | 742082 - 743215 | 39556.2 |
| hypothetical protein | AMETH_RS03695 | Not Available | Negative | 743299 - 743916 | 21861.4 |
| short-chain dehydrogenase | AMETH_RS39610 | Not Available | Positive | 743973 - 744122 | 4988.93 |
| glucosyltransferase | AMETH_RS03700 | Not Available | Negative | 744284 - 745600 | 45859.7 |
| class i sam-dependent methyltransferase | AMETH_RS03705 | Not Available | Negative | 745633 - 746628 | 36655.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
