Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | AMETH_RS34140 | Not Available | Negative | 6981558 - 6982238 | 24690.4 |
| ycei family protein | AMETH_RS34145 | Not Available | Negative | 6982349 - 6983170 | 28633.1 |
| mfs transporter | AMETH_RS34150 | Not Available | Negative | 6983167 - 6985791 | 90414.2 |
| marr family winged helix-turn-helix transcriptional regulator | AMETH_RS34155 | Not Available | Negative | 6985788 - 6986312 | 19360.0 |
| fad-binding oxidoreductase | AMETH_RS34160 | Not Available | Positive | 6986523 - 6987914 | 48947.9 |
| type ii toxin-antitoxin system vapc family toxin | AMETH_RS34165 | Not Available | Positive | 6988036 - 6988437 | 14720.7 |
| deda family protein | AMETH_RS34170 | Not Available | Negative | 6988492 - 6989205 | 26202.6 |
| hypothetical protein | AMETH_RS34175 | Not Available | Negative | 6989249 - 6989554 | 10648.8 |
| n-acetylglucosamine-6-phosphate deacetylase | AMETH_RS34180 | Not Available | Negative | 6990005 - 6991129 | 38680.5 |
| sige family rna polymerase sigma factor | AMETH_RS34185 | Not Available | Negative | 6991170 - 6991736 | 20490.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
