Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tade family type iv pilus minor pilin | AMETH_RS33035 | Not Available | Negative | 6763277 - 6763648 | 12146.7 |
| duf4244 domain-containing protein | AMETH_RS33040 | Not Available | Negative | 6763648 - 6763884 | 8387.19 |
| type ii secretion system f family protein | AMETH_RS33045 | Not Available | Negative | 6763914 - 6764477 | 19135.3 |
| type ii secretion system f family protein | AMETH_RS33050 | Not Available | Negative | 6765274 - 6766071 | 27363.7 |
| tada family conjugal transfer-associated atpase | AMETH_RS33055 | Not Available | Negative | 6766065 - 6767228 | 40543.8 |
| septum site-determining protein ssd | AMETH_RS33060 | Not Available | Negative | 6767225 - 6768298 | 37406.5 |
| had family phosphatase | AMETH_RS33065 | Not Available | Positive | 6768743 - 6769585 | 29603.2 |
| glycoside hydrolase family 3 protein | AMETH_RS33070 | Not Available | Positive | 6770105 - 6771868 | 61285.4 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | AMETH_RS33075 | Not Available | Positive | 6771865 - 6773133 | 44927.7 |
| short-chain dehydrogenase | AMETH_RS33080 | Not Available | Positive | 6773216 - 6774418 | 42983.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
