Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AMETH_RS31170 | Not Available | Negative | 6416801 - 6417520 | 25559.9 |
| mfs transporter | AMETH_RS31175 | Not Available | Negative | 6417559 - 6418845 | 44699.0 |
| pyridoxamine 5'-phosphate oxidase | AMETH_RS31180 | Not Available | Negative | 6419082 - 6419753 | 25277.6 |
| urease accessory protein ured | AMETH_RS31185 | Not Available | Negative | 6419791 - 6420543 | 25538.8 |
| urease accessory protein ureg | AMETH_RS31190 | Not Available | Negative | 6420540 - 6421238 | 24609.3 |
| short-chain dehydrogenase | AMETH_RS37535 | Not Available | Negative | 6421228 - 6421783 | 19041.8 |
| short-chain dehydrogenase | AMETH_RS31195 | Not Available | Negative | 6421783 - 6423479 | 60976.8 |
| short-chain dehydrogenase | AMETH_RS31200 | Not Available | Negative | 6423476 - 6423771 | 10807.7 |
| urease subunit gamma | AMETH_RS31205 | Not Available | Negative | 6423782 - 6424084 | 10953.2 |
| citrate synthase 2 | AMETH_RS31210 | Not Available | Positive | 6424327 - 6425469 | 40737.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
