Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMETH_RS29695 | Not Available | Positive | 6114034 - 6114735 | 24010.9 |
| site-specific integrase | AMETH_RS29700 | Not Available | Positive | 6115217 - 6115858 | 23449.1 |
| Trna-leu | Not Available | Not Available | Positive | 6115939 - 6116012 | Not Available |
| nad(p)/fad-dependent oxidoreductase | AMETH_RS29710 | Not Available | Negative | 6116055 - 6117380 | 48377.5 |
| uracil-dna glycosylase | AMETH_RS29715 | Not Available | Negative | 6117465 - 6118205 | 26630.1 |
| s10 family peptidase | AMETH_RS29720 | Not Available | Positive | 6118204 - 6119676 | 54422.0 |
| pasta domain-containing protein | AMETH_RS29725 | Not Available | Positive | 6119864 - 6120217 | 11863.1 |
| s8 family serine peptidase | AMETH_RS29730 | Not Available | Negative | 6120470 - 6122206 | 59575.1 |
| ppx/gppa phosphatase family protein | AMETH_RS29735 | Not Available | Negative | 6122289 - 6123242 | 33764.1 |
| lytic transglycosylase domain-containing protein | AMETH_RS29740 | Not Available | Negative | 6123252 - 6124343 | 37309.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
