Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like serine protease | AMETH_RS29315 | Not Available | Positive | 6035707 - 6036555 | 28391.4 |
| nad(p)/fad-dependent oxidoreductase | AMETH_RS29320 | Not Available | Negative | 6036557 - 6037531 | 33754.4 |
| class ii fumarate hydratase | AMETH_RS29325 | Not Available | Positive | 6037635 - 6039032 | 49115.5 |
| short-chain dehydrogenase | AMETH_RS29330 | Not Available | Negative | 6039075 - 6040036 | 35396.8 |
| short-chain dehydrogenase | AMETH_RS29335 | Not Available | Positive | 6040160 - 6040982 | 29013.9 |
| zf-hc2 domain-containing protein | AMETH_RS29340 | Not Available | Negative | 6040949 - 6041677 | 25775.0 |
| sigma-70 family rna polymerase sigma factor | AMETH_RS29345 | Not Available | Positive | 6041847 - 6042401 | 20264.0 |
| hoxn/hupn/nixa family nickel/cobalt transporter | AMETH_RS29350 | Not Available | Negative | 6042390 - 6043442 | 37934.6 |
| tetr/acrr family transcriptional regulator | AMETH_RS29355 | Not Available | Negative | 6043727 - 6044305 | 20701.7 |
| dmt family transporter | AMETH_RS29360 | Not Available | Positive | 6044374 - 6045300 | 31952.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
