Amycolatopsis methanolica 239

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis methanolica 239 is characterized by the presence of flagella, which suggests a capacity for motility. This trait may allow the organism to navigate its environment effectively, potentially aiding in colonization and survival in various ecological niches. The strain exhibits a single replicon, indicating a streamlined genetic organization. This can be an advantage in terms of replication efficiency and resource allocation, which may contribute to its adaptability in diverse conditions. The genomic information of Amycolatopsis methanolica 239 is cataloged under the accession number NZ_CP009110.1. This data provides a basis for understanding the genetic makeup and potential metabolic pathways of the organism, although specific metabolic capabilities or ecological roles are not provided. In summary, the presence of flagella and a singular replicon in Amycolatopsis methanolica 239 are notable traits that underscore its potential adaptability and mobility. These characteristics may play significant roles in its ecological interactions and survival strategies, although further research would be necessary to elucidate the full range of its biological implications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis methanolica
Strain239

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis methanolica 239 chromosome, complete genome.

Gene Summary

Adenine Count

1028183 bp

Thymine Count

1032505 bp

Guanine Count

2597107 bp

Cytosine Count

2579596 bp

Genome Length

7237391 bp

Protein-coding Genes

7360 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lpqb family beta-propeller domain-containing proteinAMETH_RS29025Not AvailableNegative5973063 - 597480860807.4
mtrab system histidine kinase mtrbAMETH_RS29030Not AvailableNegative5975041 - 597673561017.6
mtrab system response regulator mtraAMETH_RS29035Not AvailableNegative5976743 - 597742024674.3
dtmp kinaseAMETH_RS29040Not AvailableNegative5977495 - 597814223373.6
type ii toxin-antitoxin system vapc family toxinAMETH_RS29045Not AvailableNegative5978167 - 597861316045.4
toxin-antitoxin system hicb family antitoxinAMETH_RS29050Not AvailableNegative5978607 - 597889710867.6
adenosylhomocysteinaseAMETH_RS29055Not AvailableNegative5978956 - 598042853771.9
hypothetical proteinAMETH_RS29060Not AvailablePositive5980515 - 598281579675.6
amino acid permeaseAMETH_RS29065Not AvailableNegative5982860 - 598439553818.2
cation diffusion facilitator family transporterAMETH_RS29070Not AvailableNegative5984476 - 598539032612.0

Displaying genes 6211 – 6220 of 7467 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm00200023-Dehydroshikimic acidC7H8O5Chemical structure of 3-Dehydroshikimic acid27655-56-7
Average172.1354Da
Monoisotopic172.037173366Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.